Function reference • i2dash.scrnaseq

Components Functions for creating components, which are added with ‘i2dash::add_component()’ function:
`barplot()`	Renders a component containing a horizontal barplot.
`boxplot()`	Renders a component containing a boxplot
`heatmap()`	Renders a component containing a Heatmap.
`scatterplot()`	Renders a component containing a scatterplot with optional selection options
`violinplot()`	Renders a component containing a vertical violin plot
`bubbleplot()`	Renders a component containing a bubbleplot with optional selection options
`text_output()`	Renders a component containing output from verbatimTextOutput.
`summarize_metadata()`	Renders a component containing an HTML table of summarized sample or feature metadata of single-cell experiment objects or data.frames.
Pre-defined Pages Functions for adding pre-defined pages to the dashboard.
`add_dimred_feature_page()`	Add a dimension reduction page with feature metadata
`add_dimred_sample_page()`	Characterize and visualize dimension reductions and sample groupings / metadata.
`add_feature_expression_page()`	Add a feature expression page.
`add_feature_selection_page()`	Quantify per-gene variation and explore the threshold on the metric of variation to get the desired set of highly variable features.
`add_feature_grid_page()`	Create expression visualization for multiple selected features on a regular grid.
`add_dimred_comparison_page()`	Explore the effects of the parameters "theta" and "perplexity" of a t-stochastic neighbour embedding or "n_neighors" of a UMAP embedding.

Reference

Components

Pre-defined Pages