SC FRAMEWORK

Contents:

  • Changelog
  • RNA notebooks
  • ATAC notebooks
  • General notebooks
    • Cell type annotation and marker list assembly
    • Preparing adata for cellxgene / MaMPlan creation
    • Proportion Analysis
    • Trajectory and Pseudotime Analysis
  • sctoolbox API reference
SC FRAMEWORK
  • General notebooks
  • View page source

General notebooks

List of example notebooks:

  • Cell type annotation and marker list assembly
  • Preparing adata for cellxgene / MaMPlan creation
  • Proportion Analysis
  • Trajectory and Pseudotime Analysis
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